Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863938.1_cds_XP_016515835.1_28137
CDS Infomation

[gene=LOC107832493] [db_xref=GeneID:107832493] [protein=probable methylenetetrahydrofolate reductase isoform X3] [protein_id=XP_016515835.1] [location=join(37824..37989,38295..38530,39473..39533,40000..40082,40218..40391,40965..41138,41250..41350,41432..41543,43082..43162,43242..43419,45470..45804,46454..46537)] [gbkey=CDS]
Sequence

ATGAAGGTAATTGACAAAATTCACGAATCAGCCAAAACTGATAGAGTAGTCTTCTCCTTT
GAATTCTTTCCCCCCAAAACTGAAGATGGGGTTGATAATTTGTTCGAAAGAATGGAAAGA
ATGGTGTCACATAATCCTTCTTTCTGTGATATTACATGGGGTGCAGGTGGATCAACAGCA
GATCTGACACTTGAGATTGCAAACAGAATGCAGAACATGGTTTGTGTTGAAACCATGATG
CATTTGACTTGTACAAATATGCCTGTTGAGAAAATTGATCATGCCCTTGAAACTATCAAG
TCTAATGGGATCCAAAATGTTCTTGCTCTTCGTGGCGATCCTCCTCATGGACAAGATAAG
TTTGTTCAAGTTGAAGGTGGTTTTGCCTGTGCCTTAGATCTGGTAAAGCACATGCGGGCC
AAGTATGGAGACTACTTCGGGATAACTGTCGCGGGTTACCCAGAGGCACATCCTGATGTT
ATACCTGCTAATGGAATAGCTACACAAGAGACATATGAAAATGACCTTGCCTATCTAAAA
AAGAAGGTTGATGCTGGAGCTGATCTCATTGTAACTCAACTCTTCTATGATACTGACATT
TTCCTCAAGTTTGTCAATGATTGTCGTCAAATTGGGATAACTTGTCCTATTGTCCCGGGA
ATCATGCCCATCAACAATTATAAGGGCTTCTTGCGCATGACTGGTTTTTGCAAAACCAAG
ATCCCAGCAGAGATTACAGCTGCCTTGGAACCGATTAAGGATAACGAAGAAGCTGTCAAA
GCTTACGGAATTCACCAAGCGACTGAAATGTGCAAGAAGATTTTGGCCACTGGCATTAAG
ACCTTGCATCTTTATACATTAAACATGGAGAAATCAGCACTAGCCATTTTGATGAATCTT
GGATTGATAGAAGAGTCCAAAATTTCAAGGCCATTACCTTGGAGGCGTCCTACAAATGTT
TTCCGTGTTAAAGAAGATGTCCGTCCTATATTCTGGGCCAACCGTCCGAAGAGCTACATT
TCAAGGACCATTGGTTGGGATGAGTATCCACATGGCAGATGGGGCAATGCTCAAAATCCA
TCATATGGAGCACTTAGCGATTATCAGTTCATGAGGGCACGTTCACGTGATAAGAAACTT
CAAGAGGAATGGGCTGTTGCTCTCAATAGTGTGGAAGACATCTATGAGAGATTTATGAAC
TGCTGTCTTGGGAAGCTGAGAAGTTGTCCTTGGTCTGAGTTAGATGGGCTTCAGCCAGAG
ACGAAGATCATCGATGAACATTTGGGTAACATAAACACGAAAGGTTTCCTGACTATTAAC
AGCCAACCAGCAGTTAATGGAGCAAAATCTGATGCTCCTTCTATTGGATGGGGCGGCCCT
GGTGGATATGTTTATCAAAAGGCATACTTGGAGTTCTTTTGCTCTCGCGAAAAGTTGAAT
GCTCTTGTCGAAAAATGCAAAGCTTTCCCCTTCCTTACCTATATGGCTGTGAACAAGGAA
GGAAACTGGATTTCCAATGCCAACCAAACCGATATCAATGCAGTGACATGGGGAGTTTTC
CCAGGTAAGGAGATTGTACAACCAACGGTGGTCGATCCCGCCAGCTTCATGGTGTGGAAG
GATGAGGCATTTGAAATCTGGTCAAGAGGTTGGGCTCAATTATACCAAGAGAGTGATCCA
TCAAGAAAATTGCTTGAACAAGTTCAGAACAGTTACTTCTTGGTTAGCCTTGTCGACAAC
GATTACATCAATGGAGATTTGTTTGCCATCTTCAAGGATATCTGA

Peptide Sequence

PEP ID

XP_016515835.1
PEP Infomation

PREDICTED: probable methylenetetrahydrofolate reductase isoform X3 [Nicotiana tabacum]
Sequence

MKVIDKIHESAKTDRVVFSFEFFPPKTEDGVDNLFERMERMVSHNPSFCDITWGAGGSTA
DLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDK
FVQVEGGFACALDLVKHMRAKYGDYFGITVAGYPEAHPDVIPANGIATQETYENDLAYLK
KKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK
IPAEITAALEPIKDNEEAVKAYGIHQATEMCKKILATGIKTLHLYTLNMEKSALAILMNL
GLIEESKISRPLPWRRPTNVFRVKEDVRPIFWANRPKSYISRTIGWDEYPHGRWGNAQNP
SYGALSDYQFMRARSRDKKLQEEWAVALNSVEDIYERFMNCCLGKLRSCPWSELDGLQPE
TKIIDEHLGNINTKGFLTINSQPAVNGAKSDAPSIGWGGPGGYVYQKAYLEFFCSREKLN
ALVEKCKAFPFLTYMAVNKEGNWISNANQTDINAVTWGVFPGKEIVQPTVVDPASFMVWK
DEAFEIWSRGWAQLYQESDPSRKLLEQVQNSYFLVSLVDNDYINGDLFAIFKDI

Transcript Sequence

Gene sequence data has not been registered.